diff --git a/.github/workflows/mkdocs.yml b/.github/workflows/mkdocs.yml
index 501a427..2c118de 100644
--- a/.github/workflows/mkdocs.yml
+++ b/.github/workflows/mkdocs.yml
@@ -13,11 +13,11 @@ jobs:
   deploy:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
-      - uses: actions/setup-python@v4
+      - uses: actions/checkout@v7
+      - uses: actions/setup-python@v7
         with:
           python-version: 3.x
-      - uses: actions/cache@v4
+      - uses: actions/cache@v6
         with:
           path: .cache
           key: ${{ github.ref }}
diff --git a/.github/workflows/publish_pypi.yaml b/.github/workflows/publish_pypi.yaml
index ea3755f..ca11f77 100644
--- a/.github/workflows/publish_pypi.yaml
+++ b/.github/workflows/publish_pypi.yaml
@@ -3,14 +3,27 @@ name: Publish Python 🐍 distribution 📦 to PyPI and TestPyPI
 on: push
 
 jobs:
+  check-version:
+    name: Verify tag matches package version
+    if: startsWith(github.ref, 'refs/tags/')  # only relevant on tag pushes
+    runs-on: ubuntu-latest
+    steps:
+    - uses: actions/checkout@v7
+    - name: Verify release tag matches pyproject version
+      run: |
+        TAG="${GITHUB_REF_NAME#v}"
+        VER="$(grep -m1 '^version = ' pyproject.toml | sed -E 's/.*"([^"]+)".*/\1/')"
+        echo "tag=$TAG  pyproject=$VER"
+        test "$TAG" = "$VER"
+
   build:
     name: Build distribution 📦
     runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v4
+    - uses: actions/checkout@v7
     - name: Set up Python
-      uses: actions/setup-python@v5
+      uses: actions/setup-python@v7
       with:
         python-version: "3.x"
     - name: Install pypa/build
@@ -22,7 +35,7 @@ jobs:
     - name: Build a binary wheel and a source tarball
       run: python3 -m build
     - name: Store the distribution packages
-      uses: actions/upload-artifact@v4
+      uses: actions/upload-artifact@v7
       with:
         name: python-package-distributions
         path: dist/
@@ -33,6 +46,7 @@ jobs:
     if: startsWith(github.ref, 'refs/tags/')  # only publish to PyPI on tag pushes
     needs:
     - build
+    - check-version
     runs-on: ubuntu-latest
     environment:
       name: pypi
@@ -42,7 +56,7 @@ jobs:
 
     steps:
     - name: Download all the dists
-      uses: actions/download-artifact@v4
+      uses: actions/download-artifact@v8
       with:
         name: python-package-distributions
         path: dist/
@@ -50,29 +64,15 @@ jobs:
       uses: pypa/gh-action-pypi-publish@release/v1
 
   github-release:
-    name: >-
-      Sign the Python 🐍 distribution 📦 with Sigstore
-      and upload them to GitHub Release
+    name: Create a GitHub Release
     needs:
     - publish-to-pypi
     runs-on: ubuntu-latest
 
     permissions:
       contents: write  # IMPORTANT: mandatory for making GitHub Releases
-      id-token: write  # IMPORTANT: mandatory for sigstore
 
     steps:
-    - name: Download all the dists
-      uses: actions/download-artifact@v4
-      with:
-        name: python-package-distributions
-        path: dist/
-    - name: Sign the dists with Sigstore
-      uses: sigstore/gh-action-sigstore-python@v2.1.1
-      with:
-        inputs: >-
-          ./dist/*.tar.gz
-          ./dist/*.whl
     - name: Create GitHub Release
       env:
         GITHUB_TOKEN: ${{ github.token }}
@@ -81,21 +81,13 @@ jobs:
         '${{ github.ref_name }}'
         --repo '${{ github.repository }}'
         --notes ""
-    - name: Upload artifact signatures to GitHub Release
-      env:
-        GITHUB_TOKEN: ${{ github.token }}
-      # Upload to GitHub Release using the `gh` CLI.
-      # `dist/` contains the built packages, and the
-      # sigstore-produced signatures and certificates.
-      run: >-
-        gh release upload
-        '${{ github.ref_name }}' dist/**
-        --repo '${{ github.repository }}'
 
   publish-to-testpypi:
     name: Publish Python 🐍 distribution 📦 to TestPyPI
+    if: startsWith(github.ref, 'refs/tags/')  # only publish on tag pushes
     needs:
     - build
+    - check-version
     runs-on: ubuntu-latest
 
     environment:
@@ -107,11 +99,12 @@ jobs:
 
     steps:
     - name: Download all the dists
-      uses: actions/download-artifact@v4
+      uses: actions/download-artifact@v8
       with:
         name: python-package-distributions
         path: dist/
     - name: Publish distribution 📦 to TestPyPI
       uses: pypa/gh-action-pypi-publish@release/v1
       with:
-        repository-url: https://test.pypi.org/legacy/
\ No newline at end of file
+        repository-url: https://test.pypi.org/legacy/
+        skip-existing: true
\ No newline at end of file
diff --git a/.github/workflows/spelling.yml b/.github/workflows/spelling.yml
index 4e4356e..8e47fcc 100644
--- a/.github/workflows/spelling.yml
+++ b/.github/workflows/spelling.yml
@@ -18,7 +18,7 @@ jobs:
 
     steps:
       - name: Checkout
-        uses: actions/checkout@v4
+        uses: actions/checkout@v7
       - name: Codespell
         uses: codespell-project/actions-codespell@v2
         with:
diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml
index 01e9022..b3ecbcd 100644
--- a/.github/workflows/tests.yml
+++ b/.github/workflows/tests.yml
@@ -3,28 +3,29 @@ name: Tests
 on: push
 
 jobs:
-  build:
-
+  test:
     runs-on: ${{ matrix.os }}
     strategy:
+      fail-fast: false
       matrix:
         os: [ubuntu-latest, macos-latest, windows-latest]
+        # 3.14 blocked: pyenzyme pins fastobo<0.14, which has no 3.14 wheel.
         python-version: ["3.10", "3.11", "3.12", "3.13"]
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v7
 
-      - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v4
+      - name: Set up uv and Python ${{ matrix.python-version }}
+        uses: astral-sh/setup-uv@v9.0.0
         with:
           python-version: ${{ matrix.python-version }}
+          enable-cache: true
 
       - name: Install dependencies
-        run: |
-          python -m pip install --upgrade pip
-          python -m pip install poetry
-          poetry install --with dev
+        # --locked fails if uv.lock is out of sync with pyproject.toml.
+        run: uv sync --locked --group dev
 
       - name: Run tests with pytest
-        run: |
-          poetry run pytest --nbval --nbval-lax
\ No newline at end of file
+        # Skip live-API tests: CI runs from datacenter IPs that PubChem rate-limits.
+        # They still run locally by default with a plain `pytest`.
+        run: uv run pytest tests/ -m "not network"
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
new file mode 100644
index 0000000..c43cdd1
--- /dev/null
+++ b/.pre-commit-config.yaml
@@ -0,0 +1,7 @@
+# Run once per clone:  uv run pre-commit install
+repos:
+  - repo: https://github.com/astral-sh/uv-pre-commit
+    rev: 0.11.31
+    hooks:
+      # Re-locks uv.lock whenever pyproject.toml changes, so the two can't drift.
+      - id: uv-lock
diff --git a/mtphandler/__init__.py b/mtphandler/__init__.py
index 1f468a1..5ef98d9 100644
--- a/mtphandler/__init__.py
+++ b/mtphandler/__init__.py
@@ -1,8 +1,10 @@
 import json  # noqa
 import os  # noqa
+from importlib.metadata import version
 
 from .mtp_logging import configure_logger
 from .plate_manager import PlateManager  # noqa
 
+__version__ = version("mtphandler")
 
 configure_logger()
diff --git a/mtphandler/readers/multiskan_spectrum_parser.py b/mtphandler/readers/multiskan_spectrum_parser.py
index fa3ae42..85a111e 100644
--- a/mtphandler/readers/multiskan_spectrum_parser.py
+++ b/mtphandler/readers/multiskan_spectrum_parser.py
@@ -22,7 +22,7 @@ def read_multiskan_spectrum_1500(
     if not temperature:
         TEMP_PATTERN = r"\d{1,3}deg"
         temperature = re.findall(TEMP_PATTERN, path)[0]
-        temperature = re.split("(\d+)", temperature)[1]
+        temperature = re.split(r"(\d+)", temperature)[1]
         if not temperature:
             raise ValueError("Could not find pH in path. Please specify 'ph'.")
 
diff --git a/pyproject.toml b/pyproject.toml
index 4657115..3f036d7 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,10 +1,14 @@
+[build-system]
+requires = ["setuptools>=61"]
+build-backend = "setuptools.build_meta"
+
 [project]
 name = "mtphandler"
-version = "0.2.22"
+version = "0.2.23"
 description = "Python package for processing, enriching, and converting microtiter plate data into standardized EnzymeML time-course data, ready for data science."
 readme = "README.md"
 requires-python = ">=3.10,<3.14"
-license = { text = "MIT License" }
+license = "MIT"
 authors = [{ name = "haeussma", email = "83341109+haeussma@users.noreply.github.com" }]
 
 dependencies = [
@@ -19,8 +23,12 @@ dependencies = [
   "mdmodels>=0.2.0",
 ]
 
+[tool.setuptools.packages.find]
+include = ["mtphandler*"]
+
 [dependency-groups]
 dev = [
+  "pre-commit>=3.7.0",
   "mkdocs-material>=9.5.7",
   "pytest>=8.0.0",
   "devtools>=0.12.2",
@@ -32,3 +40,8 @@ dev = [
   "notebook<7",
   "jupyter-contrib-nbextensions>=0.7.0",
 ]
+
+[tool.pytest.ini_options]
+markers = [
+  "network: test hits a live external API (PubChem); excluded in CI datacenter runs",
+]
diff --git a/tests/unit_tests/test_mtphandler.py b/tests/unit_tests/test_mtphandler.py
index f032526..cff15eb 100644
--- a/tests/unit_tests/test_mtphandler.py
+++ b/tests/unit_tests/test_mtphandler.py
@@ -283,6 +283,7 @@ def test_define_molecule_with_non_integer_pubchem_cid(setup_handler):
         )
 
 
+@pytest.mark.network
 def test_define_molecule_without_name(setup_handler):
     # Initialize the class object
     plate_manager, plate = setup_handler
diff --git a/uv.lock b/uv.lock
index 72b655e..f3f17c0 100644
--- a/uv.lock
+++ b/uv.lock
@@ -1,5 +1,5 @@
 version = 1
-revision = 2
+revision = 3
 requires-python = ">=3.10, <3.14"
 resolution-markers = [
     "python_full_version >= '3.12'",
@@ -348,6 +348,15 @@ wheels = [
     { url = "https://files.pythonhosted.org/packages/cb/0e/02ceeec9a7d6ee63bb596121c2c8e9b3a9e150936f4fbef6ca1943e6137c/cffi-2.0.0-cp313-cp313-win_arm64.whl", hash = "sha256:256f80b80ca3853f90c21b23ee78cd008713787b1b1e93eae9f3d6a7134abd91", size = 177780, upload-time = "2025-09-08T23:23:16.761Z" },
 ]
 
+[[package]]
+name = "cfgv"
+version = "3.5.0"
+source = { registry = "https://pypi.org/simple" }
+sdist = { url = "https://files.pythonhosted.org/packages/4e/b5/721b8799b04bf9afe054a3899c6cf4e880fcf8563cc71c15610242490a0c/cfgv-3.5.0.tar.gz", hash = "sha256:d5b1034354820651caa73ede66a6294d6e95c1b00acc5e9b098e917404669132", size = 7334, upload-time = "2025-11-19T20:55:51.612Z" }
+wheels = [
+    { url = "https://files.pythonhosted.org/packages/db/3c/33bac158f8ab7f89b2e59426d5fe2e4f63f7ed25df84c036890172b412b5/cfgv-3.5.0-py2.py3-none-any.whl", hash = "sha256:a8dc6b26ad22ff227d2634a65cb388215ce6cc96bbcc5cfde7641ae87e8dacc0", size = 7445, upload-time = "2025-11-19T20:55:50.744Z" },
+]
+
 [[package]]
 name = "chardet"
 version = "5.2.0"
@@ -468,7 +477,7 @@ resolution-markers = [
     "python_full_version < '3.11'",
 ]
 dependencies = [
-    { name = "numpy", marker = "python_full_version < '3.11'" },
+    { name = "numpy" },
 ]
 sdist = { url = "https://files.pythonhosted.org/packages/66/54/eb9bfc647b19f2009dd5c7f5ec51c4e6ca831725f1aea7a993034f483147/contourpy-1.3.2.tar.gz", hash = "sha256:b6945942715a034c671b7fc54f9588126b0b8bf23db2696e3ca8328f3ff0ab54", size = 13466130, upload-time = "2025-04-15T17:47:53.79Z" }
 wheels = [
@@ -539,7 +548,7 @@ resolution-markers = [
     "python_full_version == '3.11.*'",
 ]
 dependencies = [
-    { name = "numpy", marker = "python_full_version >= '3.11'" },
+    { name = "numpy" },
 ]
 sdist = { url = "https://files.pythonhosted.org/packages/58/01/1253e6698a07380cd31a736d248a3f2a50a7c88779a1813da27503cadc2a/contourpy-1.3.3.tar.gz", hash = "sha256:083e12155b210502d0bca491432bb04d56dc3432f95a979b429f2848c3dbe880", size = 13466174, upload-time = "2025-07-26T12:03:12.549Z" }
 wheels = [
@@ -751,6 +760,15 @@ wheels = [
     { url = "https://files.pythonhosted.org/packages/50/3d/9373ad9c56321fdab5b41197068e1d8c25883b3fea29dd361f9b55116869/dill-0.4.0-py3-none-any.whl", hash = "sha256:44f54bf6412c2c8464c14e8243eb163690a9800dbe2c367330883b19c7561049", size = 119668, upload-time = "2025-04-16T00:41:47.671Z" },
 ]
 
+[[package]]
+name = "distlib"
+version = "0.4.3"
+source = { registry = "https://pypi.org/simple" }
+sdist = { url = "https://files.pythonhosted.org/packages/c9/02/bd72be9134d25ed783ecbbc38a539ffaefbf90c78418c7fb7229600dbac7/distlib-0.4.3.tar.gz", hash = "sha256:f152097224a0ae24be5a0f6bae1b9359af82133bce63f98a95f86cae1aede9ed", size = 615141, upload-time = "2026-06-12T08:04:52.847Z" }
+wheels = [
+    { url = "https://files.pythonhosted.org/packages/02/08/9c41fb51ab5b43eb21674aff13df270e8ba6c4b29c8624e328dc7a9482af/distlib-0.4.3-py2.py3-none-any.whl", hash = "sha256:4b0ce306c966eb73bc3a7b6abad017c556dadd92c44701562cd528ac7fde4d5b", size = 470628, upload-time = "2026-06-12T08:04:50.506Z" },
+]
+
 [[package]]
 name = "dotted-dict"
 version = "1.1.3"
@@ -774,7 +792,7 @@ name = "exceptiongroup"
 version = "1.3.1"
 source = { registry = "https://pypi.org/simple" }
 dependencies = [
-    { name = "typing-extensions", marker = "python_full_version < '3.11'" },
+    { name = "typing-extensions" },
 ]
 sdist = { url = "https://files.pythonhosted.org/packages/50/79/66800aadf48771f6b62f7eb014e352e5d06856655206165d775e675a02c9/exceptiongroup-1.3.1.tar.gz", hash = "sha256:8b412432c6055b0b7d14c310000ae93352ed6754f70fa8f7c34141f91c4e3219", size = 30371, upload-time = "2025-11-21T23:01:54.787Z" }
 wheels = [
@@ -827,6 +845,15 @@ wheels = [
     { url = "https://files.pythonhosted.org/packages/4e/7f/29c135a5ed6d8b391d2f56501f8ffce5c6d5963aa54c059cbb85ef25c715/fastobo-0.13.0-cp313-cp313-win_amd64.whl", hash = "sha256:ffa708db4157c40f8ff61edc228f5bfae30f88b8d96d3d3ea4a1f0eb01cba474", size = 2202928, upload-time = "2025-02-14T00:41:01.128Z" },
 ]
 
+[[package]]
+name = "filelock"
+version = "3.32.0"
+source = { registry = "https://pypi.org/simple" }
+sdist = { url = "https://files.pythonhosted.org/packages/c0/80/8232b582c4b318b817cf1274ba74976b07b34d35ef439b3eb948f98645a1/filelock-3.32.0.tar.gz", hash = "sha256:7be2ad23a14607ccc71808e68fe30848aeace7058ace17852f68e2a68e310402", size = 213757, upload-time = "2026-07-21T13:17:42.898Z" }
+wheels = [
+    { url = "https://files.pythonhosted.org/packages/06/79/b4c714bef36bc4ec2beeae1e0c124f0223888cd8c6feb1cdc56038116920/filelock-3.32.0-py3-none-any.whl", hash = "sha256:d396bea984af47333ef05e50eae7eff88c84256de6112aea0ec48a233c064fe3", size = 97732, upload-time = "2026-07-21T13:17:41.55Z" },
+]
+
 [[package]]
 name = "flatten-dict"
 version = "0.4.2"
@@ -950,6 +977,15 @@ wheels = [
     { url = "https://files.pythonhosted.org/packages/2a/39/e50c7c3a983047577ee07d2a9e53faf5a69493943ec3f6a384bdc792deb2/httpx-0.28.1-py3-none-any.whl", hash = "sha256:d909fcccc110f8c7faf814ca82a9a4d816bc5a6dbfea25d6591d6985b8ba59ad", size = 73517, upload-time = "2024-12-06T15:37:21.509Z" },
 ]
 
+[[package]]
+name = "identify"
+version = "2.6.19"
+source = { registry = "https://pypi.org/simple" }
+sdist = { url = "https://files.pythonhosted.org/packages/52/63/51723b5f116cc04b061cb6f5a561790abf249d25931d515cd375e063e0f4/identify-2.6.19.tar.gz", hash = "sha256:6be5020c38fcb07da56c53733538a3081ea5aa70d36a156f83044bfbf9173842", size = 99567, upload-time = "2026-04-17T18:39:50.265Z" }
+wheels = [
+    { url = "https://files.pythonhosted.org/packages/94/84/d9273cd09688070a6523c4aee4663a8538721b2b755c4962aafae0011e72/identify-2.6.19-py2.py3-none-any.whl", hash = "sha256:20e6a87f786f768c092a721ad107fc9df0eb89347be9396cadf3f4abbd1fb78a", size = 99397, upload-time = "2026-04-17T18:39:49.221Z" },
+]
+
 [[package]]
 name = "idna"
 version = "3.11"
@@ -1001,17 +1037,17 @@ resolution-markers = [
     "python_full_version < '3.11'",
 ]
 dependencies = [
-    { name = "colorama", marker = "python_full_version < '3.11' and sys_platform == 'win32'" },
-    { name = "decorator", marker = "python_full_version < '3.11'" },
-    { name = "exceptiongroup", marker = "python_full_version < '3.11'" },
-    { name = "jedi", marker = "python_full_version < '3.11'" },
-    { name = "matplotlib-inline", marker = "python_full_version < '3.11'" },
-    { name = "pexpect", marker = "python_full_version < '3.11' and sys_platform != 'emscripten' and sys_platform != 'win32'" },
-    { name = "prompt-toolkit", marker = "python_full_version < '3.11'" },
-    { name = "pygments", marker = "python_full_version < '3.11'" },
-    { name = "stack-data", marker = "python_full_version < '3.11'" },
-    { name = "traitlets", marker = "python_full_version < '3.11'" },
-    { name = "typing-extensions", marker = "python_full_version < '3.11'" },
+    { name = "colorama", marker = "sys_platform == 'win32'" },
+    { name = "decorator" },
+    { name = "exceptiongroup" },
+    { name = "jedi" },
+    { name = "matplotlib-inline" },
+    { name = "pexpect", marker = "sys_platform != 'emscripten' and sys_platform != 'win32'" },
+    { name = "prompt-toolkit" },
+    { name = "pygments" },
+    { name = "stack-data" },
+    { name = "traitlets" },
+    { name = "typing-extensions" },
 ]
 sdist = { url = "https://files.pythonhosted.org/packages/e5/61/1810830e8b93c72dcd3c0f150c80a00c3deb229562d9423807ec92c3a539/ipython-8.38.0.tar.gz", hash = "sha256:9cfea8c903ce0867cc2f23199ed8545eb741f3a69420bfcf3743ad1cec856d39", size = 5513996, upload-time = "2026-01-05T10:59:06.901Z" }
 wheels = [
@@ -1027,17 +1063,17 @@ resolution-markers = [
     "python_full_version == '3.11.*'",
 ]
 dependencies = [
-    { name = "colorama", marker = "python_full_version >= '3.11' and sys_platform == 'win32'" },
-    { name = "decorator", marker = "python_full_version >= '3.11'" },
-    { name = "ipython-pygments-lexers", marker = "python_full_version >= '3.11'" },
-    { name = "jedi", marker = "python_full_version >= '3.11'" },
-    { name = "matplotlib-inline", marker = "python_full_version >= '3.11'" },
-    { name = "pexpect", marker = "python_full_version >= '3.11' and sys_platform != 'emscripten' and sys_platform != 'win32'" },
-    { name = "prompt-toolkit", marker = "python_full_version >= '3.11'" },
-    { name = "pygments", marker = "python_full_version >= '3.11'" },
-    { name = "stack-data", marker = "python_full_version >= '3.11'" },
-    { name = "traitlets", marker = "python_full_version >= '3.11'" },
-    { name = "typing-extensions", marker = "python_full_version == '3.11.*'" },
+    { name = "colorama", marker = "sys_platform == 'win32'" },
+    { name = "decorator" },
+    { name = "ipython-pygments-lexers" },
+    { name = "jedi" },
+    { name = "matplotlib-inline" },
+    { name = "pexpect", marker = "sys_platform != 'emscripten' and sys_platform != 'win32'" },
+    { name = "prompt-toolkit" },
+    { name = "pygments" },
+    { name = "stack-data" },
+    { name = "traitlets" },
+    { name = "typing-extensions", marker = "python_full_version < '3.12'" },
 ]
 sdist = { url = "https://files.pythonhosted.org/packages/46/dd/fb08d22ec0c27e73c8bc8f71810709870d51cadaf27b7ddd3f011236c100/ipython-9.9.0.tar.gz", hash = "sha256:48fbed1b2de5e2c7177eefa144aba7fcb82dac514f09b57e2ac9da34ddb54220", size = 4425043, upload-time = "2026-01-05T12:36:46.233Z" }
 wheels = [
@@ -1058,7 +1094,7 @@ name = "ipython-pygments-lexers"
 version = "1.1.1"
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@@ -1982,8 +2018,8 @@ wheels = [
 
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-source = { virtual = "." }
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     { name = "httpx" },
@@ -2007,6 +2043,7 @@ dev = [
     { name = "mkdocstrings-python" },
     { name = "nbval" },
     { name = "notebook" },
+    { name = "pre-commit" },
     { name = "pytest" },
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@@ -2034,6 +2071,7 @@ dev = [
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     { name = "nbval", specifier = ">=0.11.0" },
     { name = "notebook", specifier = "<7" },
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+    { name = "identify" },
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+    { name = "pyyaml" },
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@@ -3327,7 +3403,7 @@ resolution-markers = [
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+    { name = "numpy" },
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@@ -3387,7 +3463,7 @@ resolution-markers = [
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+dependencies = [
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