Hello,
I tried to run FastOrtho with the --blast_file option, with a --mixed_genome_fasta input and I have a segmentation fault and a output saying no genome were found for all my sequences. I used the results of an atomic blast :
Ac450_1/1_1.000_646 Ac450_1/1_1.000_646 100.00 215 0 0 1 645 1 645 5e-145 509 Ac450_1/1_1.000_646 Ac450_1/1_1.000_646 100.00 215 0 0 2 646 2 646 2e-142 500 Ac450_1/1_1.000_646 Ac450_1/1_1.000_646 100.00 214 0 0 3 644 3 644 5e-138 486 Ac450_1/1_1.000_646 Ac450_1/1_1.000_646 100.00 177 0 0 644 114 644 114 4e-121 412 Ac450_1/1_1.000_646 Ac450_1/1_1.000_646 100.00 15 0 0 47 3 47 3 4e-121 39.6
(etc)
and for each ID I have the message : "No genome for Ac1_1/1_1.000_629".
The input --mixed_genome_fasta file concatenate all the sequences of all the species I study. Why do I have such an error ?
Hello,
I tried to run FastOrtho with the --blast_file option, with a --mixed_genome_fasta input and I have a segmentation fault and a output saying no genome were found for all my sequences. I used the results of an atomic blast :
Ac450_1/1_1.000_646 Ac450_1/1_1.000_646 100.00 215 0 0 1 645 1 645 5e-145 509 Ac450_1/1_1.000_646 Ac450_1/1_1.000_646 100.00 215 0 0 2 646 2 646 2e-142 500 Ac450_1/1_1.000_646 Ac450_1/1_1.000_646 100.00 214 0 0 3 644 3 644 5e-138 486 Ac450_1/1_1.000_646 Ac450_1/1_1.000_646 100.00 177 0 0 644 114 644 114 4e-121 412 Ac450_1/1_1.000_646 Ac450_1/1_1.000_646 100.00 15 0 0 47 3 47 3 4e-121 39.6(etc)
and for each ID I have the message : "No genome for Ac1_1/1_1.000_629".
The input --mixed_genome_fasta file concatenate all the sequences of all the species I study. Why do I have such an error ?