Zero inflated extension in SPSS 25 on mac not working

[marlone-henderson]

Hello. I have SPSS 25 on Mac and added R 3.3 extension, so that I could add the zero inflated extension. Both seem to be successfully added into my SPSS menu. However, when I run the zero inflated negative binomial analyses, nothing happens. There's a brief moment when I see "zero inflated" flashed at the bottom where "IBM Statistics Processor is ready" is displayed, but then no output is created.

Please advice.

[JKPeck]

Check to see that the R Essentials is working and that the R library used by this command is installed. Run this from a syntax window.
begin program r.
print(sessionInfo())
library(pscl)
end program.

[marlone-henderson]

Hello. Thank you for replying to my question. I ran the syntax command you suggested and nothing happened.

…

On Sat, Apr 18, 2020 at 9:08 AM Jon Peck ***@***.***> wrote: Check to see that the R Essentials is working and that the R library used by this command is installed. Run this from a syntax window. begin program r. print(sessionInfo()) library(pscl) end program. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#11 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/APHTBQKEHX2T3DDHJXY54ULRNGQ57ANCNFSM4MLK2YJA> .

-- You have responsibilities, in short, to use your talents for the benefit of the society which helped develop those talents. ~ John F. Kennedy

[marlone-henderson]

Hi. Actually, I think the issue may have to do with my configuration. I found these instructions but I don't see this path on my computer. I don't see a Frameworks folder On Sat, Apr 18, 2020 at 8:11 AM Marlone Henderson < marlone.henderson@gmail.com> wrote:

…

Hello. Thank you for replying to my question. I ran the syntax command you suggested and nothing happened. On Sat, Apr 18, 2020 at 9:08 AM Jon Peck ***@***.***> wrote: > Check to see that the R Essentials is working and that the R library used > by this command is installed. Run this from a syntax window. > begin program r. > print(sessionInfo()) > library(pscl) > end program. > > — > You are receiving this because you authored the thread. > Reply to this email directly, view it on GitHub > <#11 (comment)>, > or unsubscribe > <https://github.com/notifications/unsubscribe-auth/APHTBQKEHX2T3DDHJXY54ULRNGQ57ANCNFSM4MLK2YJA> > . > -- You have responsibilities, in short, to use your talents for the benefit of the society which helped develop those talents. ~ John F. Kennedy

-- You have responsibilities, in short, to use your talents for the benefit of the society which helped develop those talents. ~ John F. Kennedy

[JKPeck]

Your R Essentials appears not to be working. Try installing the Essentials starting Statistics as Admin. If that doesn't work, make sure that you have installed fixpack 2 for V25.

[marlone-henderson]

Hi. Okay, I just installed the fixpack 2 for 25. What do you recommend that I do next?

…

On Sat, Apr 18, 2020 at 9:31 AM Jon Peck ***@***.***> wrote: Your R Essentials appears not to be working. Try installing the Essentials starting Statistics as Admin. If that doesn't work, make sure that you have installed fixpack 2 for V25. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#11 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/APHTBQMVGOQ3YISXFZONDTTRNGTUNANCNFSM4MLK2YJA> .

-- You have responsibilities, in short, to use your talents for the benefit of the society which helped develop those talents. ~ John F. Kennedy

[JKPeck]

Use Admin mode and try the Essentials install again and

[marlone-henderson]

I ran that syntax command you recommended after installing the fixpack 2 and received this message in the output: On Sat, Apr 18, 2020 at 8:48 AM Marlone Henderson < marlone.henderson@gmail.com> wrote:

…

Hi. Okay, I just installed the fixpack 2 for 25. What do you recommend that I do next? On Sat, Apr 18, 2020 at 9:31 AM Jon Peck ***@***.***> wrote: > Your R Essentials appears not to be working. Try installing the > Essentials starting Statistics as Admin. If that doesn't work, make sure > that you have installed fixpack 2 for V25. > > — > You are receiving this because you authored the thread. > Reply to this email directly, view it on GitHub > <#11 (comment)>, > or unsubscribe > <https://github.com/notifications/unsubscribe-auth/APHTBQMVGOQ3YISXFZONDTTRNGTUNANCNFSM4MLK2YJA> > . > -- You have responsibilities, in short, to use your talents for the benefit of the society which helped develop those talents. ~ John F. Kennedy

-- You have responsibilities, in short, to use your talents for the benefit of the society which helped develop those talents. ~ John F. Kennedy

[JKPeck]

What message?

[marlone-henderson]

Hi. This message appeared after I ran the syntax command: Warning messages: 1: In doTryCatch(return(expr), name, parentenv, handler) : unable to load shared object '/Library/Frameworks/R.framework/Resources/modules//R_X11.so': dlopen(/Library/Frameworks/R.framework/Resources/modules//R_X11.so, 6): Library not loaded: /opt/X11/lib/libSM.6.dylib Referenced from: /Library/Frameworks/R.framework/Resources/modules//R_X11.so Reason: image not found 2: In redirection() : Unable to open connection to X11 display. R version 3.3.3 (2017-03-06) Platform: x86_64-apple-darwin13.4.0 (64-bit) Running under: OS X El Capitan 10.11.6 locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/en_US.ISO8859-1/en_US.UTF-8/en_US.ISO8859-1 attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] spss250_25.0.0.0 Error in library(pscl) : there is no package called ‘pscl’

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On Sat, Apr 18, 2020 at 9:53 AM Jon Peck ***@***.***> wrote: What message? — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#11 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/APHTBQOJFWPVBNFXNZXN4W3RNGWGXANCNFSM4MLK2YJA> .

-- You have responsibilities, in short, to use your talents for the benefit of the society which helped develop those talents. ~ John F. Kennedy

[JKPeck]

Ah. R requires an X11 package to display output, but some Mac installations do not include it :-(

See this link to install it. You might have to install the Essentials again afterwards.
https://support.apple.com/en-us/HT201341

[marlone-henderson]

Okay. Will this allow me to eventually configure the R3.3 in spss? I haven't been able to find the location of the R 3.3 following the instructions I found online.

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On Sat, Apr 18, 2020 at 9:59 AM Jon Peck ***@***.***> wrote: Ah. R requires an X11 package to display output, but some Mac installations do not include it :-( See this link to install it. You might have to install the Essentials again afterwards. https://support.apple.com/en-us/HT201341 — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#11 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/APHTBQJ4KWA5OYW3Z5JY45TRNGW5DANCNFSM4MLK2YJA> .

-- You have responsibilities, in short, to use your talents for the benefit of the society which helped develop those talents. ~ John F. Kennedy

[JKPeck]

See this link for the Essentials. They have been reorganizing the websites, so this is a little hard to find at the moment.
https://community.ibm.com/community/user/datascience/viewdocument/get-essentials-for-spss?CommunityKey=886b6874-0fb1-402c-8243-c70ef8179a99&tab=librarydocuments

[marlone-henderson]

Hi. Yes, these are the instructions I found. However, this is where I keep running into problems. According to these instructions, the R default directory for OSX is /Library/Frameworks/R.framework/Versions/3.3/Resources. However, when I click on R3.3 configuration and browse and try to follow the instructions, I don't see a "Frameworks" folder in library folder. I've scoured the internet trying to see if anyone has encountered a similar problem, but I haven't seen a solution (or at least a solution that I understand). I re-ran your command in the system after installing that X11 package and this is what I received: R version 3.3.3 (2017-03-06) Platform: x86_64-apple-darwin13.4.0 (64-bit) Running under: OS X El Capitan 10.11.6 locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/en_US.ISO8859-1/en_US.UTF-8/en_US.ISO8859-1 attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] spss250_25.0.0.0 Error in library(pscl) : there is no package called ‘pscl’ I suspect this has to do with the fact the R.3.3 isn't configured. Any ideas about how I can successfully configure it?

…

On Sat, Apr 18, 2020 at 10:24 AM Jon Peck ***@***.***> wrote: See this link for the Essentials. They have been reorganizing the websites, so this is a little hard to find at the moment. https://community.ibm.com/community/user/datascience/viewdocument/get-essentials-for-spss?CommunityKey=886b6874-0fb1-402c-8243-c70ef8179a99&tab=librarydocuments — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#11 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/APHTBQNOT3V77Y6N34VVB33RNGZ3BANCNFSM4MLK2YJA> .

-- You have responsibilities, in short, to use your talents for the benefit of the society which helped develop those talents. ~ John F. Kennedy

[JKPeck]

I'm not a Mac person, but the X11 error is gone, which is progress, so try running this to install the missing pscl package.
begin program r.
install.packages("pscl")
end program.

[marlone-henderson]

Let me say, thank you for your assistance with all of this, especially on a Saturday morning. I ran that command and then received this message: Error: End of procedure Installing package into ‘/Users/mdh2449/Library/Application Support/IBM/SPSS/Statistics/25/extensions’ (as ‘lib’ is unspecified) --- Please select a CRAN mirror for use in this session --- Error in contrib.url(repos, "source") : trying to use CRAN without setting a mirror

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On Sat, Apr 18, 2020 at 10:44 AM Jon Peck ***@***.***> wrote: I'm not a Mac person, but the X11 error is gone, which is progress, so try running this to install the missing pscl package. begin program r. install.packages("pscl") end program. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#11 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/APHTBQO7X5GCT6QCTPOXBADRNG4ERANCNFSM4MLK2YJA> .

-- You have responsibilities, in short, to use your talents for the benefit of the society which helped develop those talents. ~ John F. Kennedy