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1. Barcode Barcode Public

   A transparent ONT bacterial assembly case study for an *Acinetobacter* barcode07 isolate, built not only to generate an assembly, but to show how raw reads become an interpretable genome through QC…

   HTML 2

2. BIOPHY-HBS_Case_study BIOPHY-HBS_Case_study Public

   A reproducible bioinformatics case study of the hemoglobin beta E6V mutation, connecting FASTA parsing, pairwise alignment, BLOSUM scoring, BLAST evidence, and PDB-based structural contacts to expl…

   Python 2

3. O67940-EvidenceChain-BioInfo O67940-EvidenceChain-BioInfo Public

   A reproducible modern re-analysis of the O67940_AQUAE protein-function case study, rebuilding the evidence chain behind annotation transfer with current databases, AlphaFold, structural comparison,…

   Python

4. RNA-singlecell-seq_Bone-marrow_2025 RNA-singlecell-seq_Bone-marrow_2025 Public

   A hands-on single-cell RNA-seq bone marrow project focused on learning the full reasoning chain: how raw expression matrices become QC-filtered cells, clusters, immune-cell annotations, marker evid…

   Jupyter Notebook