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Consider pigz for compress_compendium if gzip becomes a bottleneck

Status: Open.

#946 In NCATSTranslator/Babel;

· gaurav opened on Jul 20, 2026

unique_prefixes tie-break picks the lexicographically smallest CURIE, not the valid one

Status: Open.

#945 In NCATSTranslator/Babel;

· gaurav opened on Jul 19, 2026

Add drop-in SQL tests

Status: Open.

#941 In NCATSTranslator/Babel;

· gaurav opened on Jul 18, 2026

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Babel v1.19

Produce a report of cliques without a preferred name

Status: Open.

#940 In NCATSTranslator/Babel;

· gaurav opened on Jul 18, 2026

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Babel v1.18

Identify unique HMDB synonyms

Status: Open.

#939 In NCATSTranslator/Babel;

· gaurav opened on Jul 15, 2026

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Babel v1.18

Remove small molecules from Food.txt

Status: Open.

#938 In NCATSTranslator/Babel;

· gaurav opened on Jul 15, 2026

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Babel v1.18

Type non-DrugBank foods (UMLS/RxNorm/UNII) from their NCIt classification

Status: Open.

#935 In NCATSTranslator/Babel;

· gaurav opened on Jul 13, 2026

NCBIGene: should we emit the typographic double-prime (″) as an extra synonym alongside ''?

Data Source: NCBIGene

enhancementNew feature or requestNew feature or request

Priority: Low

Status: Open.

#934 In NCATSTranslator/Babel;

· gaurav opened on Jul 13, 2026

NCBIGene: shredded-alias pieces still leak when full_name isn't the shredded value (18 rows)

Status: Open.

#933 In NCATSTranslator/Babel;

· gaurav opened on Jul 12, 2026

Retype NCBI-only DrugBank organism extracts (deferred from #828)

Status: Open.

#930 In NCATSTranslator/Babel;

· gaurav opened on Jul 12, 2026

Add biolink:ProcessedMaterial as a chemical output type for organism extracts

Status: Open.

#929 In NCATSTranslator/Babel;

· gaurav opened on Jul 12, 2026

Improve babel-slurm-resources to adjust timeouts as well

Status: Open.

#927 In NCATSTranslator/Babel;

· gaurav opened on Jul 11, 2026