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1. computational-bio-portfolio computational-bio-portfolio Public

   Computational biology and data science portfolio showcasing end-to-end analyses of transcriptomic, single-cell, and public health datasets using Python, R, and machine learning to study disease mec…

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2. immune-material-FBR immune-material-FBR Public

   Computational analysis of immune and fibroblast responses to biomaterial implantation

   Jupyter Notebook 1

3. brca-transcriptomic-ml-pipeline brca-transcriptomic-ml-pipeline Public

   End-to-end clinico-transcriptomic analysis of 1,019 TCGA-BRCA RNA-seq samples integrating differential expression, pathway enrichment (GSEA/ORA), and survival modeling using Cox regression and mach…

   Jupyter Notebook 1

4. dlbcl-transcriptomic-analysis dlbcl-transcriptomic-analysis Public

   Transcriptomic and survival analysis of 200 DLBCL patients (GEO GSE10846) using microarray data to identify subtype-specific differential expression, pathway dysregulation, and prognostic survival …

   Jupyter Notebook 1

5. breast-cancer-pathway-ml breast-cancer-pathway-ml Public

   Confounding-aware RNA-seq analysis of 94 breast cancer patients combining batch correction, multi-factor differential expression, ssGSEA pathway scoring, and machine learning to evaluate robust pre…

   Jupyter Notebook 1

6. tnbc-risk-immune-integration tnbc-risk-immune-integration Public

   Integrative systems biology workflow combining GWAS, TCGA RNA-seq, immune pathway profiling, and network analysis to identify immune-associated breast cancer susceptibility genes in TNBC.

   Jupyter Notebook 1