Hi!
Trying to run your tool I have an error message saying:
Error in rule proteins:
jobid: 6
output: proteins/test_protein.faa, proteins/test_prodigal.gff
conda-env: /PULpy/.snakemake/conda/3a6f6077
shell:
zcat genomes/test_genomic.fna.gz | prodigal -a proteins/test_protein.faa -q -f gff > proteins/test_prodigal.gff
(exited with non-zero exit code)
Prodigal is well installed and when running a similar line that the one mentioned in your code it works.
Thank you by advance for your answer!
Hi!
Trying to run your tool I have an error message saying:
Prodigal is well installed and when running a similar line that the one mentioned in your code it works.
Thank you by advance for your answer!