scMOCHA-data

scMOCHA analysis for the big data

$$ \text{Mean Heteroplasmy Count} = \frac{\sum_{i=1}^{N} \text{Heteroplasmy Sites}_i}{N} $$

Name		Name	Last commit message	Last commit date
Latest commit History 928 Commits
.R		.R
.claude/skills		.claude/skills
.github		.github
.opencode		.opencode
.pixi		.pixi
.vscode		.vscode
analysis		analysis
bak		bak
config		config
high-res		high-res
imgs		imgs
misc		misc
newplots		newplots
preprocessing		preprocessing
src		src
tests		tests
utils		utils
.env.example		.env.example
.gitattributes		.gitattributes
.gitignore		.gitignore
.lintr		.lintr
.python-version		.python-version
.uv.toml		.uv.toml
AGENTS.md		AGENTS.md
CLAUDE.md		CLAUDE.md
GEMINI.md		GEMINI.md
INSTRUCTION.md		INSTRUCTION.md
LICENSE		LICENSE
README.md		README.md
Taskfile.yml		Taskfile.yml
air.toml		air.toml
data		data
high-res-MANUSCRIPTFIGURES		high-res-MANUSCRIPTFIGURES
high-res-MANUSCRIPTFIGURES-notuse		high-res-MANUSCRIPTFIGURES-notuse
high-res-MANUSCRIPTFIGURES-notuse.chop		high-res-MANUSCRIPTFIGURES-notuse.chop
high-res-MANUSCRIPTFIGURES.chop		high-res-MANUSCRIPTFIGURES.chop
large-scale		large-scale
main.py		main.py
package.R		package.R
pixi.lock		pixi.lock
pixi.toml		pixi.toml
pyproject.toml		pyproject.toml
pyproject.toml.bak		pyproject.toml.bak
scMOCHA-data.Rproj		scMOCHA-data.Rproj
scMOCHA.batch.inputs.json		scMOCHA.batch.inputs.json
scMOCHA.batch.wdl		scMOCHA.batch.wdl
uv.lock		uv.lock

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