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  1. FushikiA_etal_2024 FushikiA_etal_2024 Public

    Code for Fushiki et al. 2024 — behavioral, connectivity, and single-cell RNA-seq analyses of a vulnerable dopaminergic neuron subtype in Parkinson's disease.

    Jupyter Notebook

  2. neuro2026-symposium-resources neuro2026-symposium-resources Public

    Forked from AllenInstitute/neuro2026-symposium-resources

  3. BrainJ BrainJ Public

    Forked from lahammond/BrainJ

    Fiji pipeline for automated serial section reconstruction and mouse brain analysis.

    ImageJ Macro

  4. AllenSDK AllenSDK Public

    Forked from AllenInstitute/AllenSDK

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook

  5. abc_atlas_access abc_atlas_access Public

    Forked from AllenInstitute/abc_atlas_access

    Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas

    Jupyter Notebook

  6. DeepLabCut DeepLabCut Public

    Forked from DeepLabCut/DeepLabCut

    Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals

    Python