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ddarriba
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Computation of Transfer Bootstrap Extra Information
- #20
#20
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lutteropp
wants to merge 16 commits into
ddarriba:dev
ddarriba/pll-modules:dev
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lutteropp:tbe
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Computation of Transfer Bootstrap Extra Information
#20
lutteropp
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ddarriba:dev
ddarriba/pll-modules:dev
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lutteropp:tbe
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Commits
Commits on May 13, 2019
added tbe extra matrix
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73df129
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Commits on Jun 12, 2019
added more extra output stuff
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398281c
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fixed compile errors
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8c3f328
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adapted to this weird cutoff value from booster
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ec3f055
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changed extra taxa table
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Commits on Jun 17, 2019
fixed computation of taxa to move
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3a150aa
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made computation of tbe extra array more like in booster
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Commits on Jun 18, 2019
remove debug counter
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2dbe97b
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removed unused tbe function
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703c143
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Commits on Jun 21, 2019
fixed bug in species_to_move computation
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c4011bc
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Commits on Jul 1, 2019
tbe functions with lock callbacks
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Revert "tbe functions with lock callbacks"
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added parallelization of TBE support via OpenMP
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2244993
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fixed bug in OpenMP parallelization (reuse of array only works single-threaded), fixed bug in early-stop (only works without extra info)
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Commits on Jul 8, 2019
added missing check for non-existing extra info
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e518b63
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fixed race condition in TBE data initialization
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6e812ef
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