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Deprecation of DEF in Cython #9

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@rmlmcfadden

See the guide for Migrating from Cython 0.29 to 3.0.

The only DEFs in mudpy were introduced as part of #4 to avoid using hard-coded values in the "friendly" C-function calls.

Eventually, we should replace the DEFs with one of the strategies recommended in the guide.

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