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Bump path-to-regexp and molstar - #7

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Bump path-to-regexp and molstar#7
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dependabot/npm_and_yarn/multi-a0e2803867

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Bumps path-to-regexp to 8.4.2 and updates ancestor dependency molstar. These dependencies need to be updated together.

Updates path-to-regexp from 0.1.7 to 8.4.2

Release notes

Sourced from path-to-regexp's releases.

v8.4.2

Fixed

  • Error on trailing backslash (#434) 9a78879

Performance

  • Minimize array allocations (#437) 937c02d
  • Improve compile performance (#436) 57247e6
    • Should improve compilation performance by ~25%
  • Remove internal tokenization during parse (#435) 5844988
    • Should improve parse performance by ~20%

Bundle size to 1.93 kB, from 1.97 kB.

pillarjs/path-to-regexp@v8.4.1...v8.4.2

v8.4.1

Fixed

  • Remove trie deduplication (#431) 6bc8e84
    • Using a trie required non-greedy matching, which regressed wildcards in non-ending mode by matching them up until the first match. For example:
      • /*foo with /a/b = /a
      • /*foo.htmlwith /a/b.html/c.html = /a/b.html
  • Allow backtrack handling to match itself (#427) 5bcd30b
    • When backtracking was introduced, it rejected matching things like /:"a"_:"b" against /foo__. This makes intuitive sense because the second parameter is not going to backtrack on _ anymore, but it's somewhat unexpected since there's no reason it shouldn't match the second _.

pillarjs/path-to-regexp@v8.4.0...v8.4.1

v8.4.0

Important

Fixed

Changed

  • Dedupes regex prefixes (pillarjs/path-to-regexp#422)
    • This will result in shorter regular expressions for some cases using optional groups
  • Rejects large optional route combinations (pillarjs/path-to-regexp#424)
    • When using groups such as /users{/delete} it will restrict the number of generated combinations to < 256, equivalent to 8 top-level optional groups and unlikely to occur in a real world application, but avoids exploding the regex size for applications that accept user created routes

... (truncated)

Changelog

Sourced from path-to-regexp's changelog.

Moved to GitHub Releases

3.0.0 / 2019-01-13

  • Always use prefix character as delimiter token, allowing any character to be a delimiter (e.g. /:att1-:att2-:att3-:att4-:att5)
  • Remove partial support, prefer escaping the prefix delimiter explicitly (e.g. \\/(apple-)?icon-:res(\\d+).png)

2.4.0 / 2018-08-26

  • Support start option to disable anchoring from beginning of the string

2.3.0 / 2018-08-20

  • Use delimiter when processing repeated matching groups (e.g. foo/bar has no prefix, but has a delimiter)

2.2.1 / 2018-04-24

  • Allow empty string with end: false to match both relative and absolute paths

2.2.0 / 2018-03-06

  • Pass token as second argument to encode option (e.g. encode(value, token))

2.1.0 / 2017-10-20

  • Handle non-ending paths where the final character is a delimiter
    • E.g. /foo/ before required either /foo/ or /foo// to match in non-ending mode

2.0.0 / 2017-08-23

  • New option! Ability to set endsWith to match paths like /test?query=string up to the query string
  • New option! Set delimiters for specific characters to be treated as parameter prefixes (e.g. /:test)
  • Remove isarray dependency
  • Explicitly handle trailing delimiters instead of trimming them (e.g. /test/ is now treated as /test/ instead of /test when matching)
  • Remove overloaded keys argument that accepted options
  • Remove keys list attached to the RegExp output
  • Remove asterisk functionality (it's a real pain to properly encode)
  • Change tokensToFunction (e.g. compile) to accept an encode function for pretty encoding (e.g. pass your own implementation)

1.7.0 / 2016-11-08

  • Allow a delimiter option to be passed in with tokensToRegExp which will be used for "non-ending" token match situations

1.6.0 / 2016-10-03

  • Populate RegExp.keys when using the tokensToRegExp method (making it consistent with the main export)
  • Allow a delimiter option to be passed in with parse
  • Updated TypeScript definition with Keys and Options updated

1.5.3 / 2016-06-15

... (truncated)

Commits
Install script changes

This version adds prepare script that runs during installation. Review the package contents before updating.


Updates molstar from 3.44.0 to 5.9.0

Release notes

Sourced from molstar's releases.

v5.9.0

  • Fix edge case when PluginSpec.animations is empty
  • Add 8K UHD option to ViewportScreenshotHelper
  • Handle MRC files with empty length header fields
  • Handle CCD bonds with Deuterium atoms
  • [Breaking] ComponentBond.Entry.map now returns ComponentBond.Pairs
  • Fix volume slice marking performance regression
  • Add GPU procedural animation (wiggle & tumble)
    • Per-vertex wiggle via fbm noise (position & group mode)
    • Per-instance tumble via fbm noise (rotation + translation)
    • Wiggle theme layer for data-driven per-group wiggle
    • enableAnimation Canvas3D param for global toggle
  • Add AnimateTime built-in for, e.g., exporting procedural animation
  • Add Procedural Animation panels
    • Viewer: structure dynamics & uncertainty
    • Mesoscale Explorer: entity dynamics
  • Fix GraphQLClient missing required headers
  • [Breaking] Use Record instead of Array for headers (assets & data-source utils)

v5.8.0

  • Dependencies: remove utils.promisify, node-fetch (#1797)
  • Fix circular dependency which causes crash in bundlers (#1791)
  • Add putty as a mol-view-spec representation.
  • Fix detecting sidechain-only structures as coarse-grained (#1420)
  • Fix clip-object transform due to missing axis normalization
  • Sequence alignment: Fix return type & improve scoring for unknown residues
  • Use PDB SEQRES block to show unresolved residues in Sequence toolbar
  • Canvas3D debug-helpers
    • [Breaking] Move helpers to an extension as a PluginBehavior (params are no longer part of Canvas3D)
    • Add helpers for clip-object, direct-volume, image, mesh
  • Fix StructureComponent node update throwing error when substructure empty
  • CSS: Avoid tooltip box flickering when hovering something under it
  • Volume slice visual
    • Fix support for volume instances
    • Fix plane mode: ensure normalized & correctly oriented
  • MolViewSpec
    • Add VolumeStreamingExtension (molstar_volume_streaming custom property)
    • Fix focusing empty selections
  • Avoid re-calculating static model properties for trajectories

v5.7.0

  • Text label improvements
    • Improve label background vertical centering
    • Handle label depth variant for correct transparent background
    • Draw border under text using fragment depth to prevent overlap on adjacent characters
    • Clamp border width to avoid exceeding SDF range
    • Increase font atlas quality (2x font size multiplier)
  • TM-align performance improvements (#1745)
  • Disable transparent outline close to opaque elements
  • Add axis param to trackball spin & rock animation

... (truncated)

Changelog

Sourced from molstar's changelog.

[v5.9.0] - 2026-05-03

  • Fix edge case when PluginSpec.animations is empty
  • Add 8K UHD option to ViewportScreenshotHelper
  • Handle MRC files with empty length header fields
  • Handle CCD bonds with Deuterium atoms
  • [Breaking] ComponentBond.Entry.map now returns ComponentBond.Pairs
  • Fix volume slice marking performance regression
  • Add GPU procedural animation (wiggle & tumble)
    • Per-vertex wiggle via fbm noise (position & group mode)
    • Per-instance tumble via fbm noise (rotation + translation)
    • Wiggle theme layer for data-driven per-group wiggle
    • enableAnimation Canvas3D param for global toggle
  • Add AnimateTime built-in for, e.g., exporting procedural animation
  • Add Procedural Animation panels
    • Viewer: structure dynamics & uncertainty
    • Mesoscale Explorer: entity dynamics
  • Fix GraphQLClient missing required headers
  • [Breaking] Use Record instead of Array for headers (assets & data-source utils)

[v5.8.0] - 2026-04-03

  • Dependencies: remove utils.promisify, node-fetch (#1797)
  • Fix circular dependency which causes crash in bundlers (#1791)
  • Add putty as a mol-view-spec representation.
  • Fix detecting sidechain-only structures as coarse-grained (#1420)
  • Fix clip-object transform due to missing axis normalization
  • Sequence alignment: Fix return type & improve scoring for unknown residues
  • Use PDB SEQRES block to show unresolved residues in Sequence toolbar
  • Canvas3D debug-helpers
    • [Breaking] Move helpers to an extension as a PluginBehavior (params are no longer part of Canvas3D)
    • Add helpers for clip-object, direct-volume, image, mesh
  • Fix StructureComponent node update throwing error when substructure empty
  • CSS: Avoid tooltip box flickering when hovering something under it
  • Volume slice visual
    • Fix support for volume instances
    • Fix plane mode: ensure normalized & correctly oriented
  • MolViewSpec
    • Add VolumeStreamingExtension (molstar_volume_streaming custom property)
    • Fix focusing empty selections
  • Avoid re-calculating static model properties for trajectories

[v5.7.0] - 2026-02-28

  • Text label improvements
    • Improve label background vertical centering
    • Handle label depth variant for correct transparent background
    • Draw border under text using fragment depth to prevent overlap on adjacent characters
    • Clamp border width to avoid exceeding SDF range
    • Increase font atlas quality (2x font size multiplier)
  • TM-align performance improvements (#1745)
  • Disable transparent outline close to opaque elements
  • Add axis param to trackball spin & rock animation

... (truncated)

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@dependabot
Bump path-to-regexp and molstar
5ceec43 
Bumps [path-to-regexp](https://github.com/pillarjs/path-to-regexp) to 8.4.2 and updates ancestor dependency [molstar](https://github.com/molstar/molstar). These dependencies need to be updated together.


Updates `path-to-regexp` from 0.1.7 to 8.4.2
- [Release notes](https://github.com/pillarjs/path-to-regexp/releases)
- [Changelog](https://github.com/pillarjs/path-to-regexp/blob/master/History.md)
- [Commits](pillarjs/path-to-regexp@v0.1.7...v8.4.2)

Updates `molstar` from 3.44.0 to 5.9.0
- [Release notes](https://github.com/molstar/molstar/releases)
- [Changelog](https://github.com/molstar/molstar/blob/master/CHANGELOG.md)
- [Commits](molstar/molstar@v3.44.0...v5.9.0)

---
updated-dependencies:
- dependency-name: path-to-regexp
  dependency-version: 8.4.2
  dependency-type: indirect
- dependency-name: molstar
  dependency-version: 5.9.0
  dependency-type: direct:production
...

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