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@genepi

Institute of Genetic Epidemiology

Medical University of Innsbruck

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  1. cloudgene cloudgene Public

    A framework to build Software As A Service (SaaS) platforms for data analysis pipelines.

    Java 40 19

  2. imputationserver imputationserver Public

    Michigan Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity

    Java 87 48

  3. nf-gwas nf-gwas Public

    A nextflow pipeline to perform state-of-the-art genome-wide association studies.

    Nextflow 84 33

  4. haplogrep3 haplogrep3 Public

    Free mtDNA Haplogroup Classification Service

    Java 36 8

  5. mtdna-server-2 mtdna-server-2 Public

    mtDNA-Server 2: A web-service and Nextflow pipeline for mitochondrial genomes

    Nextflow 23 6

  6. haplocheck haplocheck Public

    Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies

    HTML 17 2

Repositories

Showing 10 of 62 repositories
  • genepi/vntr-calling-nf's past year of commit activity
    HTML 5 MIT 1 1 0 Updated Aug 20, 2026
  • genepi/vntr-gwas-framework's past year of commit activity
    R 0 MIT 0 0 0 Updated Jun 29, 2026
  • LPA_LD_panel Public
    genepi/LPA_LD_panel's past year of commit activity
    R 0 0 0 0 Updated Jun 25, 2026
  • haplogrep3 Public

    Free mtDNA Haplogroup Classification Service

    genepi/haplogrep3's past year of commit activity
    Java 36 MIT 8 9 0 Updated Jun 9, 2026
  • genepi/haplogrep-trees's past year of commit activity
    HTML 3 MIT 1 0 0 Updated Jun 9, 2026
  • imputationserver2 Public

    Imputation Server 2 workflow to facilitate genotype imputation at scale.

    genepi/imputationserver2's past year of commit activity
    Nextflow 58 MIT 15 3 1 Updated Jun 9, 2026
  • genepi/phylotree-rcrs-16's past year of commit activity
    Makefile 0 MIT 0 0 0 Updated Jun 8, 2026
  • genepi/phylotree-rcrs-15's past year of commit activity
    Makefile 0 MIT 0 0 0 Updated Jun 8, 2026
  • genepi/phylotree-rsrs-17's past year of commit activity
    Makefile 2 MIT 0 0 0 Updated Jun 8, 2026
  • genepi/phylotree-rcrs-17's past year of commit activity
    HTML 4 MIT 0 0 0 Updated Jun 8, 2026

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