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dump tables; closes #11 #12

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dump tables; closes #11 #12

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5 changes: 3 additions & 2 deletions src/tspop.py
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Original file line number Diff line number Diff line change
Expand Up @@ -27,12 +27,13 @@ def __get_census_nodes(ts, census_time):
return census_nodes

def __replace_parents_with_pops(ts, census_nodes):
ancestor_table = ts.tables.link_ancestors(
tables = ts.dump_tables()
ancestor_table = tables.link_ancestors(
samples=ts.samples(),
ancestors=census_nodes
)

population_ids = ts.tables.nodes.population
population_ids = ts.nodes_population
local_ancestry = PopAncestry(left=ancestor_table.left,
right=ancestor_table.right,
ancestor=ancestor_table.parent,
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