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jmcmeen/README.md

John McMeen

Bioacoustics & machine-learning researcher Β· software engineer Β· educator

πŸ”— Connect

ORCID ResearchGate HuggingFace Medium

πŸ”¬ Software Projects

Project Description
bioamla ML driven bioacoustic analysis in Python
sars Species-area relationship curve fitting in Python
observa Dockerized iNaturalist open data explorer
terrana Zero-config spatial API server in Rust
gq-terminal GQ GMC Geiger counter library in Python
riffy RIFF file data parser in Python

πŸ“Š Data Analyses & Datasets

Project Description
etn-sar Analyses from the Herpetofauna of Steele Creek Park Project
appalachian-sar Analyses from the Amphibians in the Southern Appalachians Project
bioamla-datasets Curated bioacoustics datasets

πŸ“š Learning / Teaching Resources

Project Description
frogs-of-steele-creek Learning resources for ecology and bioacoustics
intro-programming-concepts-csharp Learning supplements for an introductory programming course in C#
oop-concepts-csharp Learning supplements for an object-oriented programming course in C#
discrete-structures Learning supplements for a course in discrete mathematics using Python
notes-on A collection of notes on various computer science and mathematics concepts

πŸ“„ Selected Publications

πŸ› οΈ Tech I Work (and Play) With

Python PyTorch TensorFlow scikit--learn NumPy Pandas Jupyter HuggingFace Gradio Streamlit MLflow OpenCV FastAPI Flask PostgreSQL PostGIS Docker Grafana Nginx GitHub Actions Sphinx PyQt Shell Linux C Sharp Java HTML Git GitHub

Pinned Loading

  1. sars sars Public

    Species-area relationship curve fitting in Python.

    Python

  2. observa observa Public

    A Dockerized platform for hosting and exploring iNaturalist Open Data from the AWS Open Registry.

    Shell

  3. bioamla-hub bioamla-hub Public

    Bioacoustics for Machine Learning Applications

    2

  4. bioamla bioamla Public

    A Python package + CLI for audio analysis and machine learning-based audio classification, focusing on bioacoustic data.

    Python

  5. terrana terrana Public

    Zero-config spatial API server written in Rust

    Rust

  6. riffy riffy Public

    A pure Python library for parsing RIFF (Resource Interchange File Format) files data.

    Python 1