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bugSomething isn't workingSomething isn't workingStatus: Open.#580 In nf-core/scrnaseq;cellrangerarc: CELLRANGERARC_MKGTF output breaks CELLRANGERARC_MKREF on Ensembl 110 GTFs
bugSomething isn't workingSomething isn't workingStatus: Open.#578 In nf-core/scrnaseq;cellrangerarc:
--cellranger_indexfails with "Path value cannot be null"bugSomething isn't workingSomething isn't workingStatus: Open.#576 In nf-core/scrnaseq;Naming issue when creating new reference genome with cellranger-arc
bugSomething isn't workingSomething isn't workingStatus: Open.#574 In nf-core/scrnaseq;Issue with creating config files for cellranger multi
bugSomething isn't workingSomething isn't workingStatus: Open.#567 In nf-core/scrnaseq;Add inDrops support
enhancementNew feature or requestNew feature or requestStatus: Open.#549 In nf-core/scrnaseq;igenomes file loading does not overwite null param values
bugSomething isn't workingSomething isn't workingStatus: Open.#547 In nf-core/scrnaseq;--cellranger_index expects a file and not a directory, despite what the documentation says
bugSomething isn't workingSomething isn't workingStatus: Open.#538 In nf-core/scrnaseq;Support for 3-file FASTQ inputs from SRA downloads
enhancementNew feature or requestNew feature or requestStatus: Open.#531 In nf-core/scrnaseq;CELLRANGER_MKVDJREFandCELLRANGER_MULTIfailing in the testsbugSomething isn't workingSomething isn't workingStatus: Open.#529 In nf-core/scrnaseq;cell type annotation
enhancementNew feature or requestNew feature or requestStatus: Open.#528 In nf-core/scrnaseq;BD Rhapsody support?
enhancementNew feature or requestNew feature or requestStatus: Open.#527 In nf-core/scrnaseq;