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  1. pachterlab/ember pachterlab/ember Public

    ember: Entropy Metrics for Biological ExploRation

    Python 9 1

  2. pachterlab/8cubeDB pachterlab/8cubeDB Public

    Query gene specificity in the founder mouse strains

    Python 2

  3. pachterlab/SBRGKLAYWMP_2025 pachterlab/SBRGKLAYWMP_2025 Public

    Code to generate figures for Swarna et al. 2025

    Jupyter Notebook 2

  4. scverse/gget scverse/gget Public

    🧬 gget enables efficient querying of genomic reference databases

    Python 1.2k 97

  5. pachterlab/clrcycle pachterlab/clrcycle Public

    Jupyter Notebook 5 1

  6. pachterlab/cellsieve pachterlab/cellsieve Public

    Cell Sieve: Selecting minimal cell type marker panels

    Python