Bash-Scripts-for-Thesis

This repository contains scripts used during my thesis for genomic data manipulation with Plink, genotype imputation with FImpute3, genetic parameter and GWAS analysis with GCTA, breeding value estimation with BGLR and many more

Name		Name	Last commit message	Last commit date
Gcta_script.txt		Gcta_script.txt
Genomic_selection.sh		Genomic_selection.sh
Imputation_accuracy_withped_updated.sh		Imputation_accuracy_withped_updated.sh
README.md		README.md
Ref-target imputation_updated.sh		Ref-target imputation_updated.sh
Result_extraction_script.txt		Result_extraction_script.txt
imputation_accuracy.sh		imputation_accuracy.sh

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