#
genemark
Here are 2 public repositories matching this topic...
A metagenomics pipeline project that runs sequencing QC, taxonomic profiling, assembly, gene prediction, and functional annotation using common CLI tools (FastQC, MetaPhlAn, MEGAHIT, GeneMarkS, BLAST) plus light Python/shell automation.
assembly metagenomics bioinformatics-pipeline blast fastq genemark fastqc metaphlan megahit taxonomic-profiling
-
Updated
Dec 30, 2025
Add this topic to your repo
To associate your repository with the genemark topic, visit your repo's landing page and select "manage topics."