Git-based antigen specificity database storage & management.

an integrated tool for molecular docking and virtual screening

Predicting TCR:pMHC binding from structural data

A script that computationally designs a vaccine

ZDOCK predictions and PDB structures in C++ and Python

Strategy MMIC for molecular docking

HTTP Reception / Interception Service created for internal use at Pagero AB, then open-sourced for the community.

Olfactory Receptor family Assigner (bioperl module)

Tool for directed evolution of protein receptors specifically for a ligand of interest ; implementation and fine-tuning of @zaixizhang 's PocketGen focused on maximizing binding affinity.

A parser for immune receptor gene data, mainly IMGT references

tracking polymerization processes across a membrane through TIRF experiment data

Companion scripts for DMS data processing, dose-response curve fitting and figure reproduction ("The genetic architecture of an allosteric hormone receptor", Stammnitz & Lehner, biorXiv 2025)

Companion scripts for DMS data processing, dose-response curve fitting and figure reproduction (Stammnitz & Lehner, biorXiv 2025)

GNU Radio block for AD-FMCOMMS1-EBZ

V. M. Gumerov, E. P. Andrianova, M. A. Matilla, Karen M. Page, Elizabet Monteagudo-Cascales, A. C. Dolphin, T. Krell, I. B. Zhulin (2022). Amino acid sensor conserved from bacteria to humans.

PRRDB 2.0: Pattern-Recognition Receptors & Ligands Database

Enhance image resilience against diffusion-based edits with DiffVax, an optimization-free method designed for robust image immunization.

Robot Systems

Educational visualization of 5‑HT2A engagement and recovery over time. See how spacing sessions allows sensitivity to recover. No dosing advice. On‑device. No accounts.