QC systems for metabolomics studies
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Updated
Sep 11, 2026 - R
QC systems for metabolomics studies
Collaborative workflow for untargeted metabolomics data processing and analysis using open-source tools. https://doi.org/10.3390/metabo13040463
Interactive LC–MS data browser for assay development, method optimisation, and quality control, supporting xcms-based feature detection workflows.
Scripts & Data for XCMS Workshop, Metabolomics 2018 in Seattle
The purpose of the cpc package is primarily to characterize the peaks detected using a separate peak detection method. Currently the only supported preprocessing software is XCMS.
MetaboFlow: Untargeted LC-MS Metabolomics Quad-Workflow Pipeline | 非靶向代谢组学四工作流集成分析系统 | 4 pathway enrichment workflows (ORA+QEA) | Nature-quality figures | R-based | tidymass + MetaboAnalystR + limma
Ginkgo Bioworks' extensions and fixes to XCMS
Process, visualise and analyze sets of GC/LC-MS based data
Shiny-guided R workflow for untargeted LC-MS/MS metabolomics — from .mzML to statistical analysis
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