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Return failure status for invalid SAF likelihoods #669

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Return failure status for invalid SAF likelihoods #669

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6 changes: 3 additions & 3 deletions abcSaf.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -713,7 +713,7 @@ void abcSaf::algoJointPost(double **post,
if(liks[i] < 0.0)
{
fprintf(stderr, "Negative genotype probability in %s will exit (site=%d,ind=%d,lik=%f)\n", __FUNCTION__, s, i, liks[i]);
exit(0);
exit(EXIT_FAILURE);
}
}
memcpy(hj, liks, 3*sizeof(double));
Expand Down Expand Up @@ -1775,8 +1775,8 @@ void abcSaf::algoGeno(int refId,double **liks,char *major,char *minor,int nsites
shouldBeOne = exp(res[0]-log(denominator))+exp(res[1]-log(denominator))+exp(res[2]-log(denominator));
//fprintf(stderr,"this should be one: %f\n",shouldBeOne);
if((fabs(shouldBeOne-1)>0.000001)){
fprintf(stderr,"this should be one: %f at position:(%s,%d)\n",shouldBeOne,header->target_name[refId],posi[it+1]);
exit(0);
fprintf(stderr,"this should be one: %f at position:(%s,%d)\n",shouldBeOne,header->target_name[refId],posi[it+1]);
exit(EXIT_FAILURE);
}


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