Skip to content

Pull requests: ANGSD/angsd

New pull request New
16 Open 55 Closed
16 Open 55 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

document reproducibility records for ANGSD analyses
#674 opened Sep 9, 2026 by thierrygosselin Loading…
Validate BCF contig identifiers before writing
#673 opened Sep 9, 2026 by thierrygosselin Loading…
Return failure status for invalid SAF indexes
#672 opened Sep 9, 2026 by thierrygosselin Loading…
Document reference and ancestral-allele requirements
#671 opened Sep 9, 2026 by thierrygosselin Loading…
Return failure status for incompatible SFS dimensions
#670 opened Sep 9, 2026 by thierrygosselin Loading…
1
Return failure status for invalid SAF likelihoods
#669 opened Sep 9, 2026 by thierrygosselin Loading…
Reject stale site indexes
#668 opened Sep 9, 2026 by thierrygosselin Loading…
Document ANGSD VCF allele convention
#667 opened Sep 9, 2026 by thierrygosselin Loading…
Validate genotype-likelihood error-matrix input
#666 opened Sep 9, 2026 by thierrygosselin Loading…
Handle zero-depth genotypes in allele-balance filtering
#665 opened Sep 9, 2026 by thierrygosselin Loading…
Return failure status for GL validation errors
#664 opened Sep 9, 2026 by thierrygosselin Loading…
Write the correct formula for the Watterson estimator of theta in the doc
#645 opened Jan 20, 2025 by Gullumluvl Loading…
Makefile: specify version.h as a dependency of all object files
#590 opened Aug 20, 2023 by trofi Loading…
2
add a LICENSE (GPL 2)
#379 opened Feb 9, 2021 by stephenturner Loading…
1
Bgen madness
#319 opened May 27, 2020 by e-jorsboe Collaborator Loading…
added mutual information via whichFst
#208 opened Mar 6, 2019 by nspope Contributor Loading…
2
ProTip! Adding no:label will show everything without a label.