Drop the bento-tools entry and fold cell-cell communication into scRNA-seq - #300
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…A-seq The bento entry linked to the docs homepage rather than a tutorial. Its directory was also named squidpy-spatial while holding the bento tutorial, and the squidpy tutorial sat in bentotools-subcellular-resolution, so the remaining squidpy entry moves into the correctly named directory. Cell-cell communication was the only category classifying by analysis type rather than modality, and scRNA-seq already holds analysis-type tutorials such as RNA velocity and pseudotime.
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Summary
bento-tools.readthedocs.io/en/latest/index.html, the docs homepage rather than a tutorial, and was the only one of the 33 entries doing so.squidpy-spatial/held the bento tutorial andbentotools-subcellular-resolution/held the squidpy one. With bento gone, the squidpy entry moves intosquidpy-spatial/.Cell-cell communicationback into scRNA-seq, so the LIANA+ entry moves there and the category is removed fromcategories.ymland theprimary_categoryenum. It was the only category classifying by analysis type instead of modality, and scRNA-seq already holds RNA velocity, pseudotime, compositional analysis and perturbation.Leaves 32 tutorials across 8 categories.